STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM32845.1Hypothetical protein. (258 aa)    
Predicted Functional Partners:
KRM32844.1
Hypothetical protein.
 
 0.999
KRM32846.1
Butyryl-coa dehydrogenase.
 
 
 0.990
KRM32848.1
Butyryl-coa dehydrogenase.
 
 
 0.982
KRM30614.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
  
 
 0.896
KRM30660.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
  
 
 0.896
KRM32847.1
Formyl-coenzyme a transferase; Belongs to the CoA-transferase III family.
 
 
 
 0.878
KRM32841.1
Glycolate oxidase.
 
 
 0.857
KRM32843.1
2-succinylbenzoate--coa ligase.
 
  
 0.776
KRM31575.1
Hypothetical protein.
  
 
 0.751
KRM35483.1
NADH flavin oxidoreductase NADH oxidase.
 
 
 0.727
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.