STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM31857.1ABC-type antimicrobial peptide transport system, permease component. (352 aa)    
Predicted Functional Partners:
KRM31856.1
ABC transporter, ATP-binding protein.
 
 0.986
KRM31858.1
Regulatory protein TetR.
 
     0.958
KRM30524.1
ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.923
KRM32883.1
Peptide ABC transporter ATPase.
  
 0.843
KRM35133.1
ABC transporter ATP-binding protein.
  
 0.680
KRM33545.1
Hypothetical protein.
  
 0.680
KRM33546.1
Hypothetical protein.
  
 0.680
KRM31450.1
ABC superfamily ATP binding cassette transporter ABC protein.
   
  0.585
KRM31102.1
Hypothetical protein.
   
  0.585
KRM31118.1
ABC superfamily ATP binding cassette transporter, ABC protein.
   
  0.585
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.