Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRM36597.1 | rplM | FC83_GL002471 | FC83_GL000460 | Hypothetical protein. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.988 |
| KRM36597.1 | rplT | FC83_GL002471 | FC83_GL000809 | Hypothetical protein. | rplT protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.970 |
| KRM36597.1 | rplU | FC83_GL002471 | FC83_GL000869 | Hypothetical protein. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.987 |
| KRM36597.1 | rpmA | FC83_GL002471 | FC83_GL000871 | Hypothetical protein. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.964 |
| KRM36597.1 | rpmB | FC83_GL002471 | FC83_GL002217 | Hypothetical protein. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.988 |
| KRM36597.1 | rpmE2 | FC83_GL002471 | FC83_GL000600 | Hypothetical protein. | rpmE2 protein. | 0.966 |
| KRM36597.1 | rpmG | FC83_GL002471 | FC83_GL001056 | Hypothetical protein. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family. | 0.966 |
| KRM36597.1 | rpsI | FC83_GL002471 | FC83_GL000459 | Hypothetical protein. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.969 |
| KRM36597.1 | rpsO | FC83_GL002471 | FC83_GL002470 | Hypothetical protein. | Hypothetical protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.985 |
| KRM36597.1 | rpsP | FC83_GL002471 | FC83_GL002228 | Hypothetical protein. | rpsP protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.970 |
| rplM | KRM36597.1 | FC83_GL000460 | FC83_GL002471 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Hypothetical protein. | 0.988 |
| rplM | rplT | FC83_GL000460 | FC83_GL000809 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | rplT protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.995 |
| rplM | rplU | FC83_GL000460 | FC83_GL000869 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.988 |
| rplM | rpmA | FC83_GL000460 | FC83_GL000871 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.992 |
| rplM | rpmB | FC83_GL000460 | FC83_GL002217 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.987 |
| rplM | rpmE2 | FC83_GL000460 | FC83_GL000600 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | rpmE2 protein. | 0.966 |
| rplM | rpmG | FC83_GL000460 | FC83_GL001056 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family. | 0.965 |
| rplM | rpsI | FC83_GL000460 | FC83_GL000459 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsO | FC83_GL000460 | FC83_GL002470 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Hypothetical protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.992 |
| rplM | rpsP | FC83_GL000460 | FC83_GL002228 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | rpsP protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.990 |
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