Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRM31460.1 | KRM31461.1 | FC83_GL000756 | FC83_GL000757 | Hypothetical protein. | Nucleoside 2-deoxyribosyltransferase. | 0.622 |
KRM31460.1 | KRM31462.1 | FC83_GL000756 | FC83_GL000758 | Hypothetical protein. | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.437 |
KRM31461.1 | KRM31460.1 | FC83_GL000757 | FC83_GL000756 | Nucleoside 2-deoxyribosyltransferase. | Hypothetical protein. | 0.622 |
KRM31461.1 | KRM31462.1 | FC83_GL000757 | FC83_GL000758 | Nucleoside 2-deoxyribosyltransferase. | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.763 |
KRM31461.1 | KRM31464.1 | FC83_GL000757 | FC83_GL000760 | Nucleoside 2-deoxyribosyltransferase. | A G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.533 |
KRM31461.1 | KRM31465.1 | FC83_GL000757 | FC83_GL000761 | Nucleoside 2-deoxyribosyltransferase. | Hypothetical protein; Belongs to the UPF0374 family. | 0.409 |
KRM31461.1 | recX | FC83_GL000757 | FC83_GL000759 | Nucleoside 2-deoxyribosyltransferase. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.533 |
KRM31462.1 | KRM31460.1 | FC83_GL000758 | FC83_GL000756 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Hypothetical protein. | 0.437 |
KRM31462.1 | KRM31461.1 | FC83_GL000758 | FC83_GL000757 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Nucleoside 2-deoxyribosyltransferase. | 0.763 |
KRM31462.1 | KRM31464.1 | FC83_GL000758 | FC83_GL000760 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | A G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.576 |
KRM31462.1 | KRM31465.1 | FC83_GL000758 | FC83_GL000761 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Hypothetical protein; Belongs to the UPF0374 family. | 0.489 |
KRM31462.1 | KRM33428.1 | FC83_GL000758 | FC83_GL002819 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | NOL1 NOP2 sun family protein. | 0.565 |
KRM31462.1 | KRM35860.1 | FC83_GL000758 | FC83_GL000888 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.452 |
KRM31462.1 | lysS | FC83_GL000758 | FC83_GL000574 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Lysyl-trna synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.455 |
KRM31462.1 | pheT | FC83_GL000758 | FC83_GL000838 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.437 |
KRM31462.1 | recX | FC83_GL000758 | FC83_GL000759 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.688 |
KRM31462.1 | trmB | FC83_GL000758 | FC83_GL000794 | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.455 |
KRM31464.1 | KRM31461.1 | FC83_GL000760 | FC83_GL000757 | A G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Nucleoside 2-deoxyribosyltransferase. | 0.533 |
KRM31464.1 | KRM31462.1 | FC83_GL000760 | FC83_GL000758 | A G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.576 |
KRM31464.1 | KRM31465.1 | FC83_GL000760 | FC83_GL000761 | A G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Hypothetical protein; Belongs to the UPF0374 family. | 0.682 |
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