STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM31050.1Cobalamin Fe3+-siderophore ABC transporter ATPase. (262 aa)    
Predicted Functional Partners:
KRM31051.1
Ferrichrome import ABC transporter permease FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.987
KRM31052.1
Iron compound ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.985
KRM33066.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.970
KRM33533.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.961
KRM31053.1
Iron compound ABC transporter, iron compound-binding protein.
 
 0.960
KRM33306.1
Iron chelating abc transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.960
KRM33064.1
Iron ABC transporter substrate-binding protein.
 
 0.792
KRM33529.1
Hypothetical protein.
 
 0.783
KRM33302.1
Hypothetical protein.
 
 0.772
KRM31473.1
Hypothetical protein.
  
 0.720
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.