STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM35134.1Hypothetical protein. (365 aa)    
Predicted Functional Partners:
KRM35132.1
As-48h.
 
 
 0.996
KRM35133.1
ABC transporter ATP-binding protein.
 
 
 0.982
KRM32883.1
Peptide ABC transporter ATPase.
  
 
 0.945
KRM31851.1
PTS system, trehalose-specific IIBC component.
     
 0.814
KRM31852.1
PTS system sugar-specific transporter subunit EIIA.
     
 0.814
KRM30930.1
Beta-glucosides pts, eiibca.
     
 0.814
KRM33525.1
Sucrose PTS, EIIBCA.
     
 0.814
KRM33545.1
Hypothetical protein.
  
 
 0.805
KRM33546.1
Hypothetical protein.
  
 
 0.805
KRM30601.1
ABC transporter permease.
  
 
 0.742
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.