STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM30579.1Hypothetical protein. (406 aa)    
Predicted Functional Partners:
KRM30580.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
KRM30581.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
KRM30583.1
Hypothetical protein.
 
 
 0.996
KRM30582.1
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
 0.994
KRM32859.1
Branched-chain amino acid transport system ATP-binding protein.
  
 
 0.749
KRM32858.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.723
KRM32857.1
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.692
KRM36625.1
Glutamate synthase large subunit.
     
 0.618
KRM32860.1
Leucine isoleucine valine transporter ATP-binding subunit.
  
 
 0.615
ureF
Hypothetical protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.568
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.