STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM30611.1(2Fe-2S)-binding domain protein. (171 aa)    
Predicted Functional Partners:
KRM30613.1
Xanthine dehydrogenase subunit XdhA.
 0.999
KRM30612.1
Xanthine dehydrogenase subunit XdhB.
 0.998
KRM33167.1
Xanthine dehydrogenase subunit XdhB.
 0.996
KRM33166.1
Xanthine dehydrogenase subunit XdhA.
 0.995
KRM30624.1
Hypothetical protein.
 
 
 0.901
KRM30623.1
Aldehyde oxidoreductase.
 
0.860
KRM30622.1
Hypothetical protein.
 
 
 0.834
KRM30632.1
Selenate reductase subunit YgfK.
    
 0.755
KRM30371.1
Dihydropyrimidine dehydrogenase subunit B.
    
 0.740
KRM30614.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
    
 0.694
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.