STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM30657.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
KRM30656.1
Hypothetical protein.
       0.789
KRM30655.1
Glutamate synthase subunit small.
       0.787
KRM30654.1
Hypothetical protein.
       0.770
KRM30653.1
ABC transporter, permease protein.
       0.757
KRM30651.1
ABC transporter, ATP-binding protein.
       0.755
KRM30650.1
Glycosyltransferase, group 2 family protein.
       0.753
KRM30649.1
Phosphotransferase enzyme family.
       0.752
KRM30647.1
Inosine-uridine preferring nucleoside hydrolase.
       0.751
KRM30648.1
Hypothetical protein.
       0.751
KRM30652.1
Abc transporter, permease protein.
       0.751
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.