STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM33913.1Amino acid transport protein. (450 aa)    
Predicted Functional Partners:
KRM33914.1
Proline iminopeptidase (pip); Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
 
    0.884
KRM36475.1
Amino acid transporter.
  
     0.584
KRM33141.1
Methylenetetrahydrofolate reductase.
   
  
 0.559
KRM32978.1
Alpha-glucosidase.
    
  0.508
KRM32548.1
Glycosyl hydrolase, family 13.
    
  0.508
KRM31854.1
treC protein.
    
  0.508
KRM31423.1
Oligo-1,6-glucosidase (Sucrase-isomaltase).
    
  0.508
KRM35458.1
Oligo-1,6-glucosidase (oligosaccharide alpha-1,6-glucosidase) (Sucrase-isomaltase) (Isomaltase) (Dextrin 6-alpha-D-glucanohydrolase).
    
  0.508
KRM35479.1
Alpha-amylase.
    
  0.508
KRM35480.1
Alpha-glucosidase.
    
  0.508
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
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