STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metN-3Amino acid ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (344 aa)    
Predicted Functional Partners:
KRM36692.1
Amino acid ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family.
 0.999
KRM36693.1
Methionine ABC transporter transmembrane protein.
 0.996
KRM30810.1
Binding-protein-dependent transport system inner membrane protein.
 0.985
KRM30812.1
D-methionine ABC transporter binding protein; Belongs to the nlpA lipoprotein family.
 0.980
KRM35087.1
Amino acid ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family.
 0.975
KRM32725.1
NLPA lipoprotein.
 0.974
KRM35085.1
Hypothetical protein.
 0.965
KRM33141.1
Methylenetetrahydrofolate reductase.
   
 
 0.951
KRM36332.1
Binding--dependent transport system inner membrane component family protein.
 
 
  0.907
KRM34953.1
Multidrug ABC transporter ATPase.
 
     
0.894
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
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