STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM36304.1Melibiose Na(+) transport protein. (437 aa)    
Predicted Functional Partners:
KRM36303.1
O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
 
     0.837
KRM32478.1
Glycosyl hydrolase family protein.
  
     0.763
KRM32474.1
Hypothetical protein.
 
     0.746
KRM32473.1
Hypothetical protein.
  
     0.626
KRM32477.1
Glycosyl hydrolase family 2, TIM barrel domain protein; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.598
KRM32994.1
Chromosome segregation ATPase.
  
     0.545
KRM34408.1
Oligogalacturonide transporter.
  
     0.426
KRM32476.1
MFS superfamily oligogalacturonide.
  
     0.418
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.