STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM33045.1Oxidoreductase. (282 aa)    
Predicted Functional Partners:
KRM32467.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.769
KRM36309.1
Hypothetical protein.
  
 0.769
KRM35786.1
Glyoxalase family protein.
   
 0.761
KRM34858.1
Hypothetical protein.
    
  0.723
KRM33044.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
       0.495
KRM33416.1
NADP-dependent oxidoreductase domain-containing protein.
 
0.492
KRM30666.1
NADP-dependent oxidoreductase domain-containing protein.
 
0.477
KRM30470.1
Oxidoreductase.
 
 0.464
KRM33229.1
Oxidoreductase.
 
0.456
KRM32587.1
Dehydrogenase.
 
0.455
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
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