STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM07855.1Protein tyrosine serine phosphatase. (291 aa)    
Predicted Functional Partners:
KRM08060.1
Serine tyrosine protein phosphatase.
  
  
 
0.838
KRM07854.1
Alpha beta hydrolase.
 
     0.808
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.799
KRM08046.1
Cyclophilin-type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.761
KRM10600.1
Ribonuclease G and E.
    
   0.754
KRM09203.1
Hypothetical protein.
    
   0.748
KRM08548.1
Hypothetical protein.
    
   0.713
KRM09037.1
Short-chain alcohol dehydrogenase.
    
   0.713
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
    
   0.545
KRM07856.1
Glycosyltransferase like protein.
       0.425
Your Current Organism:
Lactobacillus concavus
NCBI taxonomy Id: 1423735
Other names: L. concavus DSM 17758, Lactobacillus concavus DSM 17758
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.