STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM13638.1Malate dehydrogenase. (556 aa)    
Predicted Functional Partners:
KRM13945.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.984
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.967
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.960
KRM09047.1
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.944
KRM10641.1
Pyruvate-formate lyase.
   
 
 0.900
KRM10608.1
Pyruvate oxidase; Belongs to the TPP enzyme family.
  
 
 0.817
KRM10416.1
Pyruvate oxidase; Belongs to the TPP enzyme family.
  
 
 0.817
KRM08618.1
Malate permease.
 
  
 0.749
KRM13647.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.712
KRM10402.1
Hypothetical protein.
  
 
 0.677
Your Current Organism:
Lactobacillus concavus
NCBI taxonomy Id: 1423735
Other names: L. concavus DSM 17758, Lactobacillus concavus DSM 17758
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.