STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM78930.1Dehydrogenase related protein. (348 aa)    
Predicted Functional Partners:
KRM78556.1
Oxidoreductase.
  
     0.646
KRM78501.1
Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.594
lysS
lysS protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.582
KRM78401.1
Succinate-semialdehyde dehydrogenase NADP+.
  
  
 0.582
KRM78184.1
NAD-dependent aldehyde dehydrogenase.
  
  
 0.582
KRM79064.1
Hypothetical protein.
 
     0.486
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.485
RfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.474
KRM79486.1
Hypothetical protein.
  
  
 0.474
rbsK
Ribokinase family sugar kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
  
 0.472
Your Current Organism:
Lactobacillus dextrinicus
NCBI taxonomy Id: 1423738
Other names: L. dextrinicus DSM 20335, Lactobacillus dextrinicus DSM 20335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.