STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM78948.1HTH-type transcriptional regulator gmuR. (238 aa)    
Predicted Functional Partners:
KRM79624.1
Transcription regulator.
 
  
 0.691
CelB
Oligo-alpha-mannoside phosphotransferase system enzyme IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
    0.651
KRM78667.1
Beta-glucoside-specific phosphotransferase system (PTS), IIABC component.
  
  
 0.465
KRM79168.1
N-acetylglucosamine and glucose PTS, EIICBA.
  
  
 0.465
NagA
nagA protein.
  
  
 0.430
KRM78947.1
Hypothetical protein.
       0.423
KRM79613.1
Transcription regulator.
  
   
 0.411
Your Current Organism:
Lactobacillus dextrinicus
NCBI taxonomy Id: 1423738
Other names: L. dextrinicus DSM 20335, Lactobacillus dextrinicus DSM 20335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.