STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM78999.1Abc-type oligopeptide transport system, periplasmic component. (662 aa)    
Predicted Functional Partners:
KRM79001.1
Oligopeptide transport system permease protein AmiC.
 
 0.984
KRM79002.1
Abc transporter, oligopeptide transported permease component.
 
 0.982
KRM79003.1
Abc-type dipeptide oligopeptide nickel transport system, atpase component; Belongs to the ABC transporter superfamily.
 
 
 0.967
KRM79004.1
Oligopeptide transport ATP-binding protein amiF; Belongs to the ABC transporter superfamily.
 
 
 0.954
KRM80022.1
Binding--dependent transport system inner membrane component family protein.
 0.944
KRM80023.1
oppC protein.
 0.937
KRM78932.1
ABC transporter periplasmic subunit.
 
 
0.931
KRM79000.1
Abc-type oligopeptide transport system, periplasmic component.
 
 
0.923
KRM80024.1
Oligopeptide dipeptide ABC transporter, ATP-binding, C-terminal domain protein; Belongs to the ABC transporter superfamily.
 
 0.914
KRM80025.1
oppF protein; Belongs to the ABC transporter superfamily.
 
 
 0.868
Your Current Organism:
Lactobacillus dextrinicus
NCBI taxonomy Id: 1423738
Other names: L. dextrinicus DSM 20335, Lactobacillus dextrinicus DSM 20335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.