KRM79762.1 protein (Lactobacillus dextrinicus)

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Predicted Interactions

gene neighborhood

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Score

KRM79762.1

Hypothetical protein. (85 aa)

Predicted Functional Partners:

rplS

0.862

rplQ

0.813

rpmB

0.808

hslO

0.804

rplN

0.786

rplM

0.785

rplT

0.785

rplV

0.784

rplU

0.780

rpmA

0.780

Your Current Organism:

Lactobacillus dextrinicus

NCBI taxonomy Id: 1423738
Other names: L. dextrinicus DSM 20335, Lactobacillus dextrinicus DSM 20335

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRM79762.1	hslO	FC84_GL000458	FC84_GL000452	Hypothetical protein.	Heat shock protein Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.	0.804
KRM79762.1	rplM	FC84_GL000458	FC84_GL000275	Hypothetical protein.	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.785
KRM79762.1	rplN	FC84_GL000458	FC84_GL000255	Hypothetical protein.	50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.786
KRM79762.1	rplQ	FC84_GL000458	FC84_GL000270	Hypothetical protein.	Ribosomal protein L17.	0.813
KRM79762.1	rplS	FC84_GL000458	FC84_GL001019	Hypothetical protein.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.862
KRM79762.1	rplT	FC84_GL000458	FC84_GL001221	Hypothetical protein.	rplT protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.785
KRM79762.1	rplU	FC84_GL000458	FC84_GL000980	Hypothetical protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.780
KRM79762.1	rplV	FC84_GL000458	FC84_GL000250	Hypothetical protein.	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.784
KRM79762.1	rpmA	FC84_GL000458	FC84_GL000981	Hypothetical protein.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.780
KRM79762.1	rpmB	FC84_GL000458	FC84_GL001004	Hypothetical protein.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.	0.808
hslO	KRM79762.1	FC84_GL000452	FC84_GL000458	Heat shock protein Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.	Hypothetical protein.	0.804
rplM	KRM79762.1	FC84_GL000275	FC84_GL000458	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein.	0.785
rplM	rplN	FC84_GL000275	FC84_GL000255	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.994
rplM	rplQ	FC84_GL000275	FC84_GL000270	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L17.	0.994
rplM	rplS	FC84_GL000275	FC84_GL001019	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.992
rplM	rplT	FC84_GL000275	FC84_GL001221	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rplT protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.996
rplM	rplU	FC84_GL000275	FC84_GL000980	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplM	rplV	FC84_GL000275	FC84_GL000250	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.997
rplM	rpmA	FC84_GL000275	FC84_GL000981	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.994
rplM	rpmB	FC84_GL000275	FC84_GL001004	rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.	0.990