STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM79818.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
KRM79922.1
ptsH protein.
    
  0.906
KRM79817.1
Transporter.
       0.680
KRM78436.1
Hypothetical protein.
  
     0.606
KRM79819.1
Hypothetical protein.
       0.592
KRM79925.1
Hypothetical protein.
  
     0.542
KRM78258.1
cggR protein.
 
     0.537
uppP
Undecaprenyl pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.496
KRM79995.1
Transcriptional regulator.
  
     0.462
cutC
Copper homeostasis protein cutc; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.453
KRM79978.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
  
 0.421
Your Current Organism:
Lactobacillus dextrinicus
NCBI taxonomy Id: 1423738
Other names: L. dextrinicus DSM 20335, Lactobacillus dextrinicus DSM 20335
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.