STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM79603.1PurR family transcriptional regulator. (331 aa)    
Predicted Functional Partners:
KRM79602.1
Hypothetical protein; Belongs to the glycosyl hydrolase 35 family.
 
   
 0.822
KRM79606.1
Hypothetical protein.
 
  
 0.820
KRM79605.1
Fructose-amino acid permease.
 
  
 0.795
KRM79604.1
Sugar ABC superfamily ATP binding cassette transporter, membrane protein.
 
   
 0.784
KRM79613.1
Transcription regulator.
 
     0.784
KRM79922.1
ptsH protein.
   
 
 0.700
KRM79607.1
Cyclic beta 1-2 glucan ligase.
 
  
 0.676
KRM79608.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.612
KRM79601.1
Glucan 1,6-alpha-glucosidase.
  
  
 0.568
rbsK
Ribokinase family sugar kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 0.512
Your Current Organism:
Lactobacillus dextrinicus
NCBI taxonomy Id: 1423738
Other names: L. dextrinicus DSM 20335, Lactobacillus dextrinicus DSM 20335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.