STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM79345.1Hypothetical protein. (82 aa)    
Predicted Functional Partners:
KRM79346.1
Hypothetical protein.
 
  
 0.831
AmaP
Hypothetical protein.
 
     0.755
KRM79347.1
Hypothetical protein.
     
 0.713
KRM78381.1
Hypothetical protein.
 
  
 0.558
KRM79349.1
Short-chain dehydrogenase oxidoreductase.
  
    0.503
KRM79344.1
Sortase-like protein.
       0.497
KRM79350.1
Mit family metal ion transporter cora.
  
  
 0.419
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
       0.406
RecJ
single-stranded-DNA-specific exonuclease.
       0.406
Your Current Organism:
Lactobacillus dextrinicus
NCBI taxonomy Id: 1423738
Other names: L. dextrinicus DSM 20335, Lactobacillus dextrinicus DSM 20335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.