Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AdhE | KRM79553.1 | FC84_GL001259 | FC84_GL001734 | Iron-containing alcohol dehydrogenase family protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | 0.631 |
| KRM78885.1 | KRM79553.1 | FC84_GL000038 | FC84_GL001734 | Beta-lactamase superfamily I metal-dependent hydrolase. | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | 0.638 |
| KRM79283.1 | KRM79553.1 | FC84_GL001457 | FC84_GL001734 | Hypothetical protein. | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | 0.641 |
| KRM79553.1 | AdhE | FC84_GL001734 | FC84_GL001259 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | Iron-containing alcohol dehydrogenase family protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.631 |
| KRM79553.1 | KRM78885.1 | FC84_GL001734 | FC84_GL000038 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | Beta-lactamase superfamily I metal-dependent hydrolase. | 0.638 |
| KRM79553.1 | KRM79283.1 | FC84_GL001734 | FC84_GL001457 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | Hypothetical protein. | 0.641 |
| KRM79553.1 | rplM | FC84_GL001734 | FC84_GL000275 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.619 |
| KRM79553.1 | rplP | FC84_GL001734 | FC84_GL000252 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | rplP protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.627 |
| KRM79553.1 | rplU | FC84_GL001734 | FC84_GL000980 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.618 |
| KRM79553.1 | rplV | FC84_GL001734 | FC84_GL000250 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.636 |
| KRM79553.1 | rpmA | FC84_GL001734 | FC84_GL000981 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.619 |
| KRM79553.1 | rpsO | FC84_GL001734 | FC84_GL000898 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | Ribosomal protein S15P S13E; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.613 |
| KRM79553.1 | udk | FC84_GL001734 | FC84_GL000962 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | Uridine cytidine kinase. | 0.993 |
| rplM | KRM79553.1 | FC84_GL000275 | FC84_GL001734 | rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | 0.619 |
| rplM | rplP | FC84_GL000275 | FC84_GL000252 | rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | rplP protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.995 |
| rplM | rplU | FC84_GL000275 | FC84_GL000980 | rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.992 |
| rplM | rplV | FC84_GL000275 | FC84_GL000250 | rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.997 |
| rplM | rpmA | FC84_GL000275 | FC84_GL000981 | rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.994 |
| rplM | rpsO | FC84_GL000275 | FC84_GL000898 | rplM protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S15P S13E; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.993 |
| rplP | KRM79553.1 | FC84_GL000252 | FC84_GL001734 | rplP protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein. | 0.627 |
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