STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL69212.1AraC family transcriptional regulator. (316 aa)    
Predicted Functional Partners:
KRL64991.1
Transcriptional regulator, AraC family.
 
0.965
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.896
KRL67762.1
Transcriptional regulator, AraC family.
 
 0.886
KRL64180.1
Hypothetical protein.
 
     0.719
KRL67754.1
AraC family transcriptional regulator.
 
0.687
KRL62478.1
Transcriptional regulator, AraC family.
 
0.683
KRL62456.1
Transcriptional regulator, AraC family.
 
0.677
KRL68586.1
Transcriptional regulator.
 
 
0.666
KRL65515.1
AraC family transcriptional regulator.
 
 
0.656
KRL67727.1
Transcriptional regulatory protein.
 
0.649
Your Current Organism:
Lactobacillus diolivorans
NCBI taxonomy Id: 1423739
Other names: L. diolivorans DSM 14421, Lactobacillus diolivorans DSM 14421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.