STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL63223.1Lactaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (491 aa)    
Predicted Functional Partners:
KRL64117.1
Glutamate synthase (NADPH).
  
 
 0.953
KRL66583.1
PTS system trehalose-specific EIIBC component family protein.
   
 
 0.943
KRL69134.1
Succinate dehydrogenase.
  
 0.919
KRL69565.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.881
KRL64246.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.880
KRL67437.1
Hypothetical protein.
  
  
 0.871
KRL69110.1
Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 0.859
KRL62879.1
Fumarate reductase (flavoprotein).
  
 0.823
phnX
(2-aminoethyl)phosphonate--pyruvate aminotransferase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
 
 0.811
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
    
 0.811
Your Current Organism:
Lactobacillus diolivorans
NCBI taxonomy Id: 1423739
Other names: L. diolivorans DSM 14421, Lactobacillus diolivorans DSM 14421
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