STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL62927.1Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (321 aa)    
Predicted Functional Partners:
KRL64246.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.859
KRL67776.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
    
  0.854
KRL67438.1
Keto-hydroxyglutarate-aldolase keto-deoxy-phosphogluconate aldolase.
    
  0.848
KRL62926.1
Hypothetical protein.
       0.773
KRL64935.1
Glycolate oxidase, subunit GlcD.
   
 0.698
KRL63201.1
Lactate dehydrogenase (oxidoreductase).
   
 0.698
phnX
(2-aminoethyl)phosphonate--pyruvate aminotransferase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
  
 
 0.666
KRL62275.1
Glyoxylate reductase (NADP(+)); Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 
0.601
KRL64943.1
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); Belongs to the aldehyde dehydrogenase family.
 
 
 
  0.565
KRL64181.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 
  0.565
Your Current Organism:
Lactobacillus diolivorans
NCBI taxonomy Id: 1423739
Other names: L. diolivorans DSM 14421, Lactobacillus diolivorans DSM 14421
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