Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRL62420.1 | KRL62618.1 | FC85_GL001928 | FC85_GL001859 | Transporter, Ni2+-Co2+ transporter family protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.532 |
KRL62420.1 | KRL64467.1 | FC85_GL001928 | FC85_GL000977 | Transporter, Ni2+-Co2+ transporter family protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | Hypothetical protein; Belongs to the UPF0246 family. | 0.591 |
KRL62420.1 | KRL64997.1 | FC85_GL001928 | FC85_GL000792 | Transporter, Ni2+-Co2+ transporter family protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | Arabinanase. | 0.443 |
KRL62420.1 | KRL65505.1 | FC85_GL001928 | FC85_GL000054 | Transporter, Ni2+-Co2+ transporter family protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | Hypothetical protein. | 0.401 |
KRL62618.1 | KRL62420.1 | FC85_GL001859 | FC85_GL001928 | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Transporter, Ni2+-Co2+ transporter family protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.532 |
KRL64467.1 | KRL62420.1 | FC85_GL000977 | FC85_GL001928 | Hypothetical protein; Belongs to the UPF0246 family. | Transporter, Ni2+-Co2+ transporter family protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.591 |
KRL64997.1 | KRL62420.1 | FC85_GL000792 | FC85_GL001928 | Arabinanase. | Transporter, Ni2+-Co2+ transporter family protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.443 |
KRL65505.1 | KRL62420.1 | FC85_GL000054 | FC85_GL001928 | Hypothetical protein. | Transporter, Ni2+-Co2+ transporter family protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.401 |