STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL69134.1Succinate dehydrogenase. (772 aa)    
Predicted Functional Partners:
KRL63213.1
NADH oxidase domain protein.
   
 0.989
KRL62475.1
Oxidoreductase, FAD FMN-binding protein.
   
 0.984
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.981
KRL69315.1
Acetaldehyde dehydrogenase, acetylating; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.958
KRL62879.1
Fumarate reductase (flavoprotein).
  
0.958
KRL69077.1
Dihydropyrimidine dehydrogenase subunit B.
 
 0.958
KRL64797.1
acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.943
KRL65521.1
Hypothetical protein.
   
 0.942
KRL69135.1
Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
  
 0.938
argH
Argininosuccinate lyase.
    
 0.932
Your Current Organism:
Lactobacillus diolivorans
NCBI taxonomy Id: 1423739
Other names: L. diolivorans DSM 14421, Lactobacillus diolivorans DSM 14421
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.