STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL66477.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
KRL66478.1
Glutathione S-transferase.
 
   
 0.717
KRL66481.1
Hypothetical protein.
 
     0.558
KRL66476.1
ABC superfamily ATP binding cassette transporter, membrane protein.
       0.535
KRL66479.1
Hypothetical protein.
       0.523
KRL66480.1
Isochorismatase family protein.
       0.523
KRL66475.1
ABC superfamily ATP binding cassette transporter, ABC protein.
       0.454
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.452
KRL66498.1
DJ-1 PfpI family protein.
  
    0.452
KRL66487.1
NAD-dependent deacetylase family protein.
 
 
  0.429
Your Current Organism:
Lactobacillus diolivorans
NCBI taxonomy Id: 1423739
Other names: L. diolivorans DSM 14421, Lactobacillus diolivorans DSM 14421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.