rpsT protein (Lactobacillus diolivorans) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

rpsT

Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (87 aa)

Predicted Functional Partners:

rpsO

0.999

rpsP

0.998

KRL65292.1

0.997

rplM

0.997

rplU

0.997

rpmA

0.997

rpmB

0.997

rpsU

0.997

rpmE2

0.997

rpmG

0.996

Your Current Organism:

Lactobacillus diolivorans

NCBI taxonomy Id: 1423739
Other names: L. diolivorans DSM 14421, Lactobacillus diolivorans DSM 14421

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRL65292.1	rplM	FC85_GL000115	FC85_GL000116	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
KRL65292.1	rplU	FC85_GL000115	FC85_GL001140	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
KRL65292.1	rpmA	FC85_GL000115	FC85_GL001142	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
KRL65292.1	rpmB	FC85_GL000115	FC85_GL001165	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.	0.996
KRL65292.1	rpmE2	FC85_GL000115	FC85_GL002099	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein L31.	0.994
KRL65292.1	rpmG	FC85_GL000115	FC85_GL000014	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family.	0.997
KRL65292.1	rpsO	FC85_GL000115	FC85_GL003093	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
KRL65292.1	rpsP	FC85_GL000115	FC85_GL001177	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.999
KRL65292.1	rpsT	FC85_GL000115	FC85_GL003092	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.997
KRL65292.1	rpsU	FC85_GL000115	FC85_GL001278	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bS21 family.	0.992
rplM	KRL65292.1	FC85_GL000116	FC85_GL000115	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rplU	FC85_GL000116	FC85_GL001140	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplM	rpmA	FC85_GL000116	FC85_GL001142	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplM	rpmB	FC85_GL000116	FC85_GL001165	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplM	rpmE2	FC85_GL000116	FC85_GL002099	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L31.	0.997
rplM	rpmG	FC85_GL000116	FC85_GL000014	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family.	0.997
rplM	rpsO	FC85_GL000116	FC85_GL003093	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.998
rplM	rpsP	FC85_GL000116	FC85_GL001177	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rplM	rpsT	FC85_GL000116	FC85_GL003092	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.997
rplM	rpsU	FC85_GL000116	FC85_GL001278	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bS21 family.	0.997