STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL83173.1Hypothetical protein. (761 aa)    
Predicted Functional Partners:
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
    
  0.927
KRL83171.1
Hypothetical protein.
 
     0.920
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
 0.908
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
 0.907
scpA
Segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.907
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
 0.906
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
   
 0.901
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
  0.900
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
 0.899
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
  0.898
Your Current Organism:
Lactobacillus equi
NCBI taxonomy Id: 1423740
Other names: L. equi DSM 15833 = JCM 10991, Lactobacillus equi DSM 15833, Lactobacillus equi DSM 15833 = JCM 10991, Lactobacillus equi JCM 10991, Lactobacillus equi JCM 10991 = DSM 15833
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.