STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM08730.1Ureidoglycolate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (355 aa)    
Predicted Functional Partners:
KRM08729.1
Allantoin catabolism protein.
 
  
  0.949
KRM08733.1
Hypothetical protein.
 
     0.821
KRM08731.1
Membrane protein.
 
    0.772
KRM08732.1
Hypothetical protein.
 
    0.765
KRM08728.1
N-carbamoyl-L-amino-acid hydrolase.
 
    0.674
KRM08734.1
Carbamate kinase; Belongs to the carbamate kinase family.
       0.547
KRM08727.1
Allantoinase.
 
    0.544
KRM08737.1
Major facilitator family transporter.
 
    0.529
KRM08735.1
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase.
  
 
  0.482
KRM09896.1
Hypothetical protein.
 
     0.465
Your Current Organism:
Lactobacillus farraginis
NCBI taxonomy Id: 1423743
Other names: L. farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis DSM 18382, Lactobacillus farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis JCM 14108, Lactobacillus farraginis JCM 14108 = DSM 18382
Server load: low (14%) [HD]