STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM07410.1Acyl-CoA synthetase (AMP-forming) AMP-acid ligse II. (373 aa)    
Predicted Functional Partners:
KRM07409.1
Acyl-CoA reductase (LuxC).
 
 
 0.983
KRM10823.1
Acetaldehyde dehydrogenase, acetylating.
   
 0.847
KRM05903.1
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); Belongs to the aldehyde dehydrogenase family.
 
 
 0.841
KRM06359.1
Lactaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.819
KRM10134.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.819
KRM09826.1
Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)); Belongs to the aldehyde dehydrogenase family.
   
 0.819
KRM07411.1
Xanthine uracil permease.
  
    0.785
KRM03619.1
Thioesterase.
  
 
 0.748
KRM07408.1
3-oxoacyl-ACP reductase.
 
     0.704
KRM07448.1
Nitrate reductase, alpha chain.
     
 0.687
Your Current Organism:
Lactobacillus farraginis
NCBI taxonomy Id: 1423743
Other names: L. farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis DSM 18382, Lactobacillus farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis JCM 14108, Lactobacillus farraginis JCM 14108 = DSM 18382
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.