STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM12237.1Fic family protein. (416 aa)    
Predicted Functional Partners:
KRM10285.1
Stba-like protein.
    
   0.735
KRM09985.1
Chaperone DnaK.
    
   0.735
KRM01110.1
Signal transduction histidine kinase.
  
     0.529
KRM12238.1
Microcin C7 resistance MccF related protein.
       0.491
KRM03276.1
CAAX amino terminal protease family protein.
  
     0.439
KRM01789.1
ABC transporter ATP-binding membrane spanning permease - possible multidrug resistance.
  
 
   0.414
KRM03757.1
Multidrug ABC superfamily ATP binding cassette transporter, permease protein.
 
     0.400
Your Current Organism:
Lactobacillus farraginis
NCBI taxonomy Id: 1423743
Other names: L. farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis DSM 18382, Lactobacillus farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis JCM 14108, Lactobacillus farraginis JCM 14108 = DSM 18382
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.