STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM10943.1Abc1 like protein. (348 aa)    
Predicted Functional Partners:
KRM10944.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.986
KRM10945.1
Taurine-transporting ATPase.
 
 
 0.986
KRM10952.1
Acetyltransferase.
 
     0.728
KRM10948.1
O-acetylhomoserine aminocarboxypropyltransferase.
  
    0.673
KRM10946.1
Abc1 like protein.
 
    
0.663
KRM10949.1
Metal-dependent amidase aminoacylase carboxypeptidase.
  
    0.663
KRM10947.1
Malate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.657
KRM10950.1
Aspartate tyrosine aromatic aminotransferase.
       0.648
KRM10951.1
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.648
KRM08408.1
NADPH-dependent FMN reductase.
 
 
  0.636
Your Current Organism:
Lactobacillus farraginis
NCBI taxonomy Id: 1423743
Other names: L. farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis DSM 18382, Lactobacillus farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis JCM 14108, Lactobacillus farraginis JCM 14108 = DSM 18382
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