STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM10138.1Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein. (531 aa)    
Predicted Functional Partners:
KRM03834.1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.906
KRM03833.1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.894
KRM03832.1
ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 0.879
KRM03831.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.857
KRM10137.1
Muconate cycloisomerase.
  
    0.746
KRM01781.1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.581
KRM01779.1
ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 
 0.565
KRM01782.1
Peptide ABC superfamily ATP binding cassette transporter, ABC protein.
 
 
 0.545
KRM01780.1
ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 
 0.519
KRM01783.1
ABC transporter, substrate-binding protein, family 5.
  
 
0.502
Your Current Organism:
Lactobacillus farraginis
NCBI taxonomy Id: 1423743
Other names: L. farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis DSM 18382, Lactobacillus farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis JCM 14108, Lactobacillus farraginis JCM 14108 = DSM 18382
Server load: low (28%) [HD]