Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRM08420.1 | KRM08421.1 | FD41_GL000194 | FD41_GL000195 | Shikimate kinase. | Prephenate dehydrogenase. | 0.984 |
| KRM08420.1 | KRM08422.1 | FD41_GL000194 | FD41_GL000196 | Shikimate kinase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.996 |
| KRM08420.1 | KRM09830.1 | FD41_GL000194 | FD41_GL002369 | Shikimate kinase. | 3-deoxy-7-phosphoheptulonate synthase. | 0.867 |
| KRM08420.1 | KRM10957.1 | FD41_GL000194 | FD41_GL001986 | Shikimate kinase. | Prephenate dehydrotase. | 0.764 |
| KRM08420.1 | aroB | FD41_GL000194 | FD41_GL002368 | Shikimate kinase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.998 |
| KRM08420.1 | aroC | FD41_GL000194 | FD41_GL000197 | Shikimate kinase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.986 |
| KRM08420.1 | aroD | FD41_GL000194 | FD41_GL000203 | Shikimate kinase. | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.937 |
| KRM08420.1 | aroE | FD41_GL000194 | FD41_GL000193 | Shikimate kinase. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.998 |
| KRM08421.1 | KRM08420.1 | FD41_GL000195 | FD41_GL000194 | Prephenate dehydrogenase. | Shikimate kinase. | 0.984 |
| KRM08421.1 | KRM08422.1 | FD41_GL000195 | FD41_GL000196 | Prephenate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.998 |
| KRM08421.1 | KRM09830.1 | FD41_GL000195 | FD41_GL002369 | Prephenate dehydrogenase. | 3-deoxy-7-phosphoheptulonate synthase. | 0.849 |
| KRM08421.1 | KRM10957.1 | FD41_GL000195 | FD41_GL001986 | Prephenate dehydrogenase. | Prephenate dehydrotase. | 0.917 |
| KRM08421.1 | aroB | FD41_GL000195 | FD41_GL002368 | Prephenate dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.735 |
| KRM08421.1 | aroC | FD41_GL000195 | FD41_GL000197 | Prephenate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.993 |
| KRM08421.1 | aroE | FD41_GL000195 | FD41_GL000193 | Prephenate dehydrogenase. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.813 |
| KRM08422.1 | KRM08420.1 | FD41_GL000196 | FD41_GL000194 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Shikimate kinase. | 0.996 |
| KRM08422.1 | KRM08421.1 | FD41_GL000196 | FD41_GL000195 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Prephenate dehydrogenase. | 0.998 |
| KRM08422.1 | KRM09830.1 | FD41_GL000196 | FD41_GL002369 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 3-deoxy-7-phosphoheptulonate synthase. | 0.716 |
| KRM08422.1 | KRM10957.1 | FD41_GL000196 | FD41_GL001986 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Prephenate dehydrotase. | 0.802 |
| KRM08422.1 | aroB | FD41_GL000196 | FD41_GL002368 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.994 |
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