STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM09487.1Glycosyltransferase. (315 aa)    
Predicted Functional Partners:
KRM09488.1
Cell wall teichoic acid glycosylation protein GtcA.
 
 
 0.905
KRM09489.1
Hypothetical protein.
       0.661
KRM11040.1
Integral membrane protein.
 
  
 0.546
KRM09730.1
methionyl-tRNA formyltransferase.
 
 
 0.540
KRM10846.1
Hypothetical protein.
 
  
 0.509
KRM04330.1
Integral membrane protein.
 
  
 0.491
KRM09486.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.443
Your Current Organism:
Lactobacillus farraginis
NCBI taxonomy Id: 1423743
Other names: L. farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis DSM 18382, Lactobacillus farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis JCM 14108, Lactobacillus farraginis JCM 14108 = DSM 18382
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.