STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metN-4ABC superfamily ATP binding cassette transporter, binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (367 aa)    
Predicted Functional Partners:
KRM09394.1
D-methionine transport system permease protein MetI.
 0.990
KRM09395.1
NLPA lipoprotein.
 0.985
KRM03291.1
Methionine ABC superfamily ATP binding cassette transporter, membrane protein.
 0.978
KRM08741.1
ABC transporter permease protein.
 0.977
KRM10098.1
Metal ion ABC superfamily ATP binding cassette transporter, membrane protein.
 0.976
KRM03289.1
Methionine ABC superfamily ATP binding cassette transporter, binding protein; Belongs to the nlpA lipoprotein family.
 0.973
KRM08739.1
NLPA lipoprotein; Belongs to the nlpA lipoprotein family.
 0.972
KRM10097.1
ABC superfamily ATP binding cassette transporter, binding protein; Belongs to the nlpA lipoprotein family.
 0.971
KRM08444.1
Xenobiotic-transporting ATPase.
 
   
 
0.905
KRM03833.1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
      0.899
Your Current Organism:
Lactobacillus farraginis
NCBI taxonomy Id: 1423743
Other names: L. farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis DSM 18382, Lactobacillus farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis JCM 14108, Lactobacillus farraginis JCM 14108 = DSM 18382
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