STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN04574.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
KRN03608.1
TPR repeat-containing protein.
   
   0.794
KRN03659.1
O-linked transferase.
   
   0.794
KRN04719.1
Hypothetical protein.
  
     0.750
KRN04595.1
Hypothetical protein.
  
     0.722
KRN04524.1
Hypothetical protein.
  
     0.665
KRN03871.1
Hypothetical protein.
  
     0.658
KRN04495.1
Hypothetical protein.
  
     0.650
KRN04494.1
Hypothetical protein.
  
     0.609
KRN03537.1
Glycopeptide antibiotics resistance protein.
  
     0.565
KRN04538.1
Hypothetical protein.
  
     0.561
Your Current Organism:
Lactobacillus floricola
NCBI taxonomy Id: 1423744
Other names: L. floricola DSM 23037 = JCM 16512, Lactobacillus floricola DSM 23037, Lactobacillus floricola DSM 23037 = JCM 16512, Lactobacillus floricola JCM 16512, Lactobacillus floricola JCM 16512 = DSM 23037, Lactobacillus floricola Ryu1-2, Lactobacillus sp. Ryu1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.