STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN04652.1Oligopeptide-binding protein. (550 aa)    
Predicted Functional Partners:
KRN04656.1
Oligopeptide ABC transporter.
 
 0.937
KRN04657.1
Peptide ABC transporter, permease protein.
 
 0.936
KRN04658.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.887
KRN04659.1
Nickel-transporting ATPase.
 
 0.823
KRN03828.1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.693
KRN03830.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.676
KRN04653.1
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
 
  
 
0.663
KRN03827.1
Oligopeptide ABC transporter permease component OppC.
 
 
 0.660
KRN03829.1
ABC superfamily ATP binding cassette transporter ABC protein; Belongs to the ABC transporter superfamily.
 
 
 0.649
KRN03826.1
Peptide ABC superfamily ATP binding cassette transporter, binding protein.
  
 
0.573
Your Current Organism:
Lactobacillus floricola
NCBI taxonomy Id: 1423744
Other names: L. floricola DSM 23037 = JCM 16512, Lactobacillus floricola DSM 23037, Lactobacillus floricola DSM 23037 = JCM 16512, Lactobacillus floricola JCM 16512, Lactobacillus floricola JCM 16512 = DSM 23037, Lactobacillus floricola Ryu1-2, Lactobacillus sp. Ryu1-2
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