STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN04502.1Two-component response regulator. (220 aa)    
Predicted Functional Partners:
KRN04501.1
His Kinase A domain protein.
 0.996
KRN03886.1
Two-component sensor.
 0.915
KRN03536.1
Sensor histidine kinase.
 0.911
KRN04857.1
Two-component system response regulatory system histidine kinase.
 0.850
KRN04917.1
Hypothetical protein.
 0.839
KRN04504.1
Hypothetical protein.
 
     0.831
KRN04503.1
Hypothetical protein.
 
   
 0.820
KRN03645.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.790
KRN04505.1
Beta-lactamase domain-containing protein.
       0.521
KRN03840.1
Non-specific serine threonine protein kinase.
    
 0.510
Your Current Organism:
Lactobacillus floricola
NCBI taxonomy Id: 1423744
Other names: L. floricola DSM 23037 = JCM 16512, Lactobacillus floricola DSM 23037, Lactobacillus floricola DSM 23037 = JCM 16512, Lactobacillus floricola JCM 16512, Lactobacillus floricola JCM 16512 = DSM 23037, Lactobacillus floricola Ryu1-2, Lactobacillus sp. Ryu1-2
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