STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN04508.1Hypothetical protein. (312 aa)    
Predicted Functional Partners:
KRN04507.1
Hypothetical protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.
 
     0.827
KRN04506.1
Hypothetical protein; Belongs to the ArsC family.
 
     0.666
KRN03621.1
Metallo-beta-lactamase superfamily hydrolase.
 
  
 0.650
KRN03605.1
Hypothetical protein.
  
     0.647
KRN03592.1
Cell division protein ftsq.
 
     0.633
KRN03575.1
Septation ring formation regulator EzrA.
  
     0.628
KRN03525.1
Competence protein.
  
    0.526
KRN04689.1
Hypothetical protein.
 
     0.508
KRN03620.1
Hypothetical protein.
   
  
 0.507
KRN03659.1
O-linked transferase.
  
     0.498
Your Current Organism:
Lactobacillus floricola
NCBI taxonomy Id: 1423744
Other names: L. floricola DSM 23037 = JCM 16512, Lactobacillus floricola DSM 23037, Lactobacillus floricola DSM 23037 = JCM 16512, Lactobacillus floricola JCM 16512, Lactobacillus floricola JCM 16512 = DSM 23037, Lactobacillus floricola Ryu1-2, Lactobacillus sp. Ryu1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.