STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC87_GL000578Unannotated protein. (117 aa)    
Predicted Functional Partners:
GCA_001311215_00176
Unannotated protein.
       0.773
FC87_GL000577
Unannotated protein.
       0.675
GCA_001311215_00481
Unannotated protein.
  
     0.672
dinG
Unannotated protein; 3'-5' exonuclease.
 
    0.668
GCA_001311215_00173
Unannotated protein.
  
    0.621
GCA_001311215_00171
Unannotated protein.
  
    0.584
GCA_001311215_00263
Unannotated protein.
  
     0.566
GCA_001311215_00304
Unannotated protein.
  
     0.563
FC87_GL000569
Unannotated protein.
  
     0.543
FC87_GL000382
Unannotated protein.
  
     0.539
Your Current Organism:
Lactobacillus florum
NCBI taxonomy Id: 1423745
Other names: L. florum DSM 22689 = JCM 16035, Lactobacillus florum DSM 22689, Lactobacillus florum DSM 22689 = JCM 16035, Lactobacillus florum F9-1, Lactobacillus florum JCM 16035, Lactobacillus florum JCM 16035 = DSM 22689, Lactobacillus florum NRIC 0771, Lactobacillus sp. F9-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.