STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC87_GL000441Unannotated protein. (78 aa)    
Predicted Functional Partners:
FC87_GL000442
Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.660
FC87_GL000443
Unannotated protein.
       0.595
GCA_001311215_00986
Unannotated protein.
       0.595
FC87_GL001039
Unannotated protein.
  
    0.586
FC87_GL000700
Unannotated protein.
  
    0.586
FC87_GL000506
Unannotated protein.
  
  
 0.581
rpiA
Unannotated protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.579
GCA_001311215_01443
Unannotated protein.
  
    0.579
nadE
Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
  
 
  0.531
FC87_GL000440
Unannotated protein.
       0.521
Your Current Organism:
Lactobacillus florum
NCBI taxonomy Id: 1423745
Other names: L. florum DSM 22689 = JCM 16035, Lactobacillus florum DSM 22689, Lactobacillus florum DSM 22689 = JCM 16035, Lactobacillus florum F9-1, Lactobacillus florum JCM 16035, Lactobacillus florum JCM 16035 = DSM 22689, Lactobacillus florum NRIC 0771, Lactobacillus sp. F9-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.