STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311215_01086Unannotated protein. (79 aa)    
Predicted Functional Partners:
FC87_GL000378
Unannotated protein.
     0.994
GCA_001311215_01065
Unannotated protein.
  
 
  0.714
GCA_001311215_01066
Unannotated protein.
  
 
  0.714
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.714
FC87_GL001307
Unannotated protein.
 
     0.501
FC87_GL001024
Unannotated protein.
     
 0.480
FC87_GL000384
Unannotated protein.
  
 
  0.460
FC87_GL000106
Unannotated protein.
   
 
 0.457
GCA_001311215_01625
Unannotated protein.
   
 
 0.457
FC87_GL000856
Unannotated protein.
   
 
 0.457
Your Current Organism:
Lactobacillus florum
NCBI taxonomy Id: 1423745
Other names: L. florum DSM 22689 = JCM 16035, Lactobacillus florum DSM 22689, Lactobacillus florum DSM 22689 = JCM 16035, Lactobacillus florum F9-1, Lactobacillus florum JCM 16035, Lactobacillus florum JCM 16035 = DSM 22689, Lactobacillus florum NRIC 0771, Lactobacillus sp. F9-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.