STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL27670.1ABC superfamily ATP binding cassette transporter, membrane protein. (188 aa)    
Predicted Functional Partners:
KRL27672.1
ABC superfamily ATP binding cassette transporter permease protein.
 
  
 0.987
KRL27671.1
ABC superfamily ATP binding cassette transporter ABC protein.
 
  
 0.972
KRL27673.1
Hypothetical protein.
       0.648
KRL26014.1
Hypothetical protein.
 
    0.547
KRL27669.1
Ribosylpyrimidine nucleosidase.
 
     0.516
KRL27674.1
CPA1 family monovalent cation proton (H+) antiporter-1.
       0.486
KRL27741.1
Hypothetical protein.
  
     0.452
KRL27362.1
Hypothetical protein.
  
     0.437
KRL27677.1
XRE family transcriptional regulator.
  
     0.404
KRL28114.1
ABC superfamily ATP binding cassette transporter, membrane protein.
  
  
 0.400
Your Current Organism:
Lactobacillus frumenti
NCBI taxonomy Id: 1423746
Other names: L. frumenti DSM 13145, Lactobacillus frumenti DSM 13145
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