STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL27782.1Alpha beta superfamily hydrolase. (319 aa)    
Predicted Functional Partners:
KRL27091.1
Cupin 2 conserved barrel domain protein.
    0.905
KRL27781.1
Galactoside O-acetyltransferase.
       0.774
KRL27783.1
Hypothetical protein.
       0.661
KRL28303.1
Glycosyltransferase.
    
   0.611
KRL28304.1
Glycosyltransferase.
    
   0.611
KRL27733.1
Glycosyltransferase.
    
   0.611
KRL27891.1
Glycosyltransferase.
    
   0.611
KRL27892.1
Glycosyltransferase.
    
   0.611
KRL27195.1
Glycosyltransferase.
    
   0.611
KRL26174.1
Oligosaccharide repeat unit polymerase Wzy.
    
   0.611
Your Current Organism:
Lactobacillus frumenti
NCBI taxonomy Id: 1423746
Other names: L. frumenti DSM 13145, Lactobacillus frumenti DSM 13145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.