STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL27011.1Amino acid ABC superfamily ATP binding cassette transporter, membrane protein. (222 aa)    
Predicted Functional Partners:
KRL27010.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.987
KRL27013.1
ABC superfamily ATP binding cassette transporter substrate binding protein.
 
  0.965
KRL27023.1
ABC transporter related.
 0.930
KRL27900.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.925
KRL28058.1
ABC transporter related.
 0.911
KRL27103.1
Amino acid ABC superfamily ATP binding cassette transporter, binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.902
KRL27009.1
uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
  0.894
KRL28603.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.888
KRL25966.1
Amino acid ABC superfamily ATP binding cassette transporter, binding protein.
 0.878
KRL27012.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
  
 
0.862
Your Current Organism:
Lactobacillus frumenti
NCBI taxonomy Id: 1423746
Other names: L. frumenti DSM 13145, Lactobacillus frumenti DSM 13145
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