STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL27190.1Hypothetical protein. (480 aa)    
Predicted Functional Partners:
KRL27192.1
Hypothetical protein.
 
    0.781
KRL27194.1
Hypothetical protein.
 
  
 0.772
KRL27191.1
Hypothetical protein.
  
  
 0.724
KRL27193.1
Beta(1,3)galactosyltransferase EpsH.
  
  
 0.715
KRL27181.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.707
KRL27180.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.699
KRL26178.1
UDP-galactopyranose mutase.
  
  
 0.693
KRL27208.1
Hypothetical protein; Belongs to the glycosyl hydrolase 68 family.
 
     0.671
KRL27777.1
Bifunctional deaminase-reductase domain protein.
  
    0.582
KRL27196.1
Sugar transferase.
  
  
 0.576
Your Current Organism:
Lactobacillus frumenti
NCBI taxonomy Id: 1423746
Other names: L. frumenti DSM 13145, Lactobacillus frumenti DSM 13145
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